Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 MIR149-201ENST00000384879 89 ntBASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 AC113404.2-201ENST00000507884 177 ntBASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 AC011840.4-201ENST00000578471 627 ntBASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 AC138894.3-201ENST00000603787 634 ntBASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1G3Q9Y6M4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CSNK1G3Q9Y6M4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CSNK1G3Q9Y6M4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CSNK1G3Q9Y6M4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CSNK1G3Q9Y6M4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CSNK1G3Q9Y6M4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.89■□□□□ 0.46
CSNK1G3Q9Y6M4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CSNK1G3Q9Y6M4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 AL353801.3-201ENST00000609898 542 ntBASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1G3Q9Y6M4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 NSUN5P1-202ENST00000421140 1535 ntBASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 NSUN5P2-203ENST00000457352 1529 ntBASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 POM121L3P-201ENST00000419331 1163 ntBASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms