Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 Z99916.2-201ENST00000604037 246 ntBASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 CR769767.2-201ENST00000622735 460 ntBASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBB1Q9H4B7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 KRT18P23-201ENST00000435622 1283 ntBASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 AP001412.1-201ENST00000608405 714 ntBASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBB1Q9H4B7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 AP003071.4-201ENST00000562276 1284 ntBASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 AL353719.1-201ENST00000566847 864 ntBASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB1Q9H4B7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 PP12613-201ENST00000424958 2230 ntBASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 WWOX-216ENST00000569818 525 ntBASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 AL645608.8-201ENST00000606034 2086 ntBASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB1Q9H4B7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms