Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 HCG4P8-203ENST00000443049 980 ntBASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 AL109659.2-201ENST00000606809 1674 ntBASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 AC008556.1-201ENST00000610908 2040 ntBASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 AC090164.3-201ENST00000610780 2143 ntBASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 IRX1P1-201ENST00000438849 1838 ntBASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLDND2Q8NHS1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 NOC2LP1-202ENST00000452600 2235 ntBASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 KRT18P48-201ENST00000434763 852 ntBASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 AL157888.1-201ENST00000631930 593 ntBASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDND2Q8NHS1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms