Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CCNYL1Q8N7R7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 KRT18P41-201ENST00000518924 1277 ntBASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCNYL1Q8N7R7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 MIR564-202ENST00000385049 94 ntBASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 RARRES2P10-201ENST00000564312 460 ntBASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.1■□□□□ 0.49
CCNYL1Q8N7R7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 FSCN1P1-201ENST00000568912 1481 ntBASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 AL023284.2-201ENST00000405850 579 ntBASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 MIR4651-201ENST00000582622 73 ntBASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 AP000692.2-201ENST00000608391 879 ntBASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL1Q8N7R7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms