Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 PCDH8P1-201ENST00000428983 2773 ntBASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 AC004980.1-204ENST00000429707 299 ntBASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 LINC00554-201ENST00000564841 3011 ntBASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM53Q6P2H8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 SDHAP1-207ENST00000440850 2000 ntBASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM53Q6P2H8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 AD000864.1-201ENST00000624076 2295 ntBASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM53Q6P2H8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms