Protein–RNA interactions for Protein: Q68G74

LHX8, LIM/homeobox protein Lhx8, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX8Q68G74 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LHX8Q68G74 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
LHX8Q68G74 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX8Q68G74 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.19■□□□□ 0.82
LHX8Q68G74 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX8Q68G74 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX8Q68G74 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
LHX8Q68G74 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 LST1-206ENST00000376090 689 ntTSL 2 BASIC20.18■□□□□ 0.82
LHX8Q68G74 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 LST1-209ENST00000376096 565 ntTSL 2 BASIC20.18■□□□□ 0.82
LHX8Q68G74 LST1-210ENST00000376099 610 ntTSL 2 BASIC20.18■□□□□ 0.82
LHX8Q68G74 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LHX8Q68G74 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 LST1-214ENST00000418507 726 ntTSL 2 BASIC20.18■□□□□ 0.82
LHX8Q68G74 KRT18P27-201ENST00000427733 1299 ntBASIC20.18■□□□□ 0.82
LHX8Q68G74 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.18■□□□□ 0.82
LHX8Q68G74 KRT18P2-201ENST00000447938 1258 ntBASIC20.18■□□□□ 0.82
LHX8Q68G74 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.18■□□□□ 0.82
LHX8Q68G74 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.18■□□□□ 0.82
LHX8Q68G74 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.18■□□□□ 0.82
LHX8Q68G74 AL596442.2-201ENST00000610240 980 ntBASIC20.18■□□□□ 0.82
LHX8Q68G74 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.18■□□□□ 0.82
LHX8Q68G74 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.18■□□□□ 0.82
LHX8Q68G74 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.18■□□□□ 0.82
LHX8Q68G74 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LHX8Q68G74 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LHX8Q68G74 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX8Q68G74 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX8Q68G74 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LHX8Q68G74 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LHX8Q68G74 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LHX8Q68G74 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LHX8Q68G74 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.17■□□□□ 0.82
LHX8Q68G74 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LHX8Q68G74 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.17■□□□□ 0.82
LHX8Q68G74 MCCD1P2-201ENST00000423228 335 ntBASIC20.17■□□□□ 0.82
LHX8Q68G74 METTL21AP1-201ENST00000438852 635 ntBASIC20.17■□□□□ 0.82
LHX8Q68G74 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.17■□□□□ 0.82
LHX8Q68G74 YBX1P5-201ENST00000509441 847 ntBASIC20.17■□□□□ 0.82
LHX8Q68G74 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.17■□□□□ 0.82
LHX8Q68G74 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.17■□□□□ 0.82
LHX8Q68G74 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.17■□□□□ 0.82
LHX8Q68G74 AC004223.2-201ENST00000590309 544 ntBASIC20.17■□□□□ 0.82
LHX8Q68G74 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LHX8Q68G74 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.17■□□□□ 0.82
LHX8Q68G74 AC064836.3-201ENST00000607928 673 ntBASIC20.17■□□□□ 0.82
LHX8Q68G74 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.17■□□□□ 0.82
LHX8Q68G74 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LHX8Q68G74 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX8Q68G74 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX8Q68G74 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LHX8Q68G74 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX8Q68G74 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LHX8Q68G74 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX8Q68G74 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LHX8Q68G74 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX8Q68G74 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LHX8Q68G74 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LHX8Q68G74 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LHX8Q68G74 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.16■□□□□ 0.82
LHX8Q68G74 KRT18P65-201ENST00000439811 1286 ntBASIC20.16■□□□□ 0.82
LHX8Q68G74 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LHX8Q68G74 CYMP-203ENST00000474680 1263 ntBASIC20.16■□□□□ 0.82
LHX8Q68G74 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.16■□□□□ 0.82
LHX8Q68G74 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.16■□□□□ 0.82
LHX8Q68G74 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX8Q68G74 RFPL4AP1-201ENST00000530883 850 ntBASIC20.16■□□□□ 0.82
LHX8Q68G74 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
LHX8Q68G74 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.16■□□□□ 0.82
LHX8Q68G74 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.16■□□□□ 0.82
LHX8Q68G74 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.16■□□□□ 0.82
LHX8Q68G74 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.16■□□□□ 0.82
LHX8Q68G74 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX8Q68G74 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
LHX8Q68G74 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LHX8Q68G74 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.16■□□□□ 0.82
LHX8Q68G74 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.16■□□□□ 0.82
LHX8Q68G74 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX8Q68G74 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX8Q68G74 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
LHX8Q68G74 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.16■□□□□ 0.82
LHX8Q68G74 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.16■□□□□ 0.82
LHX8Q68G74 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.16■□□□□ 0.82
LHX8Q68G74 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LHX8Q68G74 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.16■□□□□ 0.82
LHX8Q68G74 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LHX8Q68G74 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LHX8Q68G74 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.15■□□□□ 0.82
LHX8Q68G74 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LHX8Q68G74 AC073621.1-201ENST00000392730 636 ntBASIC20.15■□□□□ 0.82
LHX8Q68G74 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms