Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 NOC2LP1-202ENST00000452600 2235 ntBASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN20Q4JDL3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN20Q4JDL3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN20Q4JDL3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN20Q4JDL3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN20Q4JDL3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 TMPOP1-202ENST00000424642 1267 ntBASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN20Q4JDL3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 AL359075.1-203ENST00000462729 1002 ntBASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
PTPN20Q4JDL3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 AL391807.1-203ENST00000604392 2365 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms