Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SLC1A1P43005 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC1A1P43005 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC1A1P43005 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC1A1P43005 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC1A1P43005 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC1A1P43005 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC1A1P43005 KRT17P2-201ENST00000300992 1314 ntBASIC19.19■□□□□ 0.66
SLC1A1P43005 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC1A1P43005 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC1A1P43005 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
SLC1A1P43005 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC1A1P43005 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC1A1P43005 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SLC1A1P43005 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC1A1P43005 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC1A1P43005 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SLC1A1P43005 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC1A1P43005 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC1A1P43005 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.18■□□□□ 0.66
SLC1A1P43005 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC1A1P43005 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SLC1A1P43005 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC1A1P43005 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC1A1P43005 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC1A1P43005 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC1A1P43005 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC1A1P43005 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC1A1P43005 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 AC093010.1-201ENST00000473625 1624 ntBASIC19.18■□□□□ 0.66
SLC1A1P43005 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A1P43005 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.17■□□□□ 0.66
SLC1A1P43005 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A1P43005 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A1P43005 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC1A1P43005 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A1P43005 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC1A1P43005 TSPY14P-201ENST00000303979 915 ntBASIC19.17■□□□□ 0.66
SLC1A1P43005 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC1A1P43005 MIR1238-201ENST00000408483 83 ntBASIC19.17■□□□□ 0.66
SLC1A1P43005 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC1A1P43005 AL390955.1-201ENST00000428694 934 ntBASIC19.17■□□□□ 0.66
SLC1A1P43005 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A1P43005 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC1A1P43005 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A1P43005 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
SLC1A1P43005 AP006294.2-201ENST00000641667 209 ntBASIC19.17■□□□□ 0.66
SLC1A1P43005 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC1A1P43005 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A1P43005 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A1P43005 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC1A1P43005 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC1A1P43005 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC1A1P43005 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms