Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP11P24347 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MMP11P24347 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.4■□□□□ 0.38
MMP11P24347 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
MMP11P24347 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MMP11P24347 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.39■□□□□ 0.38
MMP11P24347 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MMP11P24347 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MMP11P24347 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 AC018470.1-201ENST00000624790 3129 ntBASIC17.39■□□□□ 0.37
MMP11P24347 LETM1P2-201ENST00000597330 2178 ntBASIC17.39■□□□□ 0.37
MMP11P24347 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MMP11P24347 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
MMP11P24347 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP11P24347 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MMP11P24347 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP11P24347 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
MMP11P24347 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP11P24347 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
MMP11P24347 AL136038.4-201ENST00000603606 1261 ntBASIC17.39■□□□□ 0.37
MMP11P24347 AC010240.3-201ENST00000607688 395 ntBASIC17.39■□□□□ 0.37
MMP11P24347 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MMP11P24347 AC083906.6-201ENST00000641366 219 ntBASIC17.39■□□□□ 0.37
MMP11P24347 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP11P24347 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP11P24347 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
MMP11P24347 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP11P24347 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP11P24347 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MMP11P24347 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.38■□□□□ 0.37
MMP11P24347 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP11P24347 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP11P24347 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MMP11P24347 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
MMP11P24347 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP11P24347 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP11P24347 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MMP11P24347 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP11P24347 AL391807.1-203ENST00000604392 2365 ntBASIC17.38■□□□□ 0.37
MMP11P24347 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP11P24347 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP11P24347 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP11P24347 AL354751.1-201ENST00000412768 1863 ntBASIC17.38■□□□□ 0.37
MMP11P24347 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP11P24347 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MMP11P24347 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP11P24347 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP11P24347 ATP5G2P1-201ENST00000433580 426 ntBASIC17.38■□□□□ 0.37
MMP11P24347 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP11P24347 AC011498.5-201ENST00000592027 486 ntBASIC17.38■□□□□ 0.37
MMP11P24347 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP11P24347 AC068587.9-201ENST00000641814 219 ntBASIC17.38■□□□□ 0.37
MMP11P24347 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP11P24347 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MMP11P24347 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MMP11P24347 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP11P24347 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MMP11P24347 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP11P24347 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP11P24347 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP11P24347 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
MMP11P24347 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MMP11P24347 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP11P24347 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 KRT18P48-201ENST00000434763 852 ntBASIC17.37■□□□□ 0.37
MMP11P24347 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.37■□□□□ 0.37
MMP11P24347 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.37■□□□□ 0.37
MMP11P24347 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.37■□□□□ 0.37
MMP11P24347 MIR3180-4-201ENST00000582223 153 ntBASIC17.37■□□□□ 0.37
MMP11P24347 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP11P24347 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP11P24347 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
MMP11P24347 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MMP11P24347 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms