Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.66■□□□□ 0.26
CD53P19397 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD53P19397 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.66■□□□□ 0.26
CD53P19397 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.66■□□□□ 0.26
CD53P19397 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD53P19397 AC011298.2-201ENST00000617989 482 ntBASIC16.66■□□□□ 0.26
CD53P19397 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD53P19397 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD53P19397 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.66■□□□□ 0.26
CD53P19397 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD53P19397 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CD53P19397 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CD53P19397 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.66■□□□□ 0.26
CD53P19397 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD53P19397 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 CCR12P-201ENST00000446203 998 ntBASIC16.65■□□□□ 0.26
CD53P19397 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.65■□□□□ 0.26
CD53P19397 AC008040.2-201ENST00000461049 708 ntBASIC16.65■□□□□ 0.26
CD53P19397 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.65■□□□□ 0.26
CD53P19397 YBX1P2-201ENST00000489612 999 ntBASIC16.65■□□□□ 0.26
CD53P19397 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CD53P19397 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.65■□□□□ 0.26
CD53P19397 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.65■□□□□ 0.26
CD53P19397 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.65■□□□□ 0.26
CD53P19397 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.65■□□□□ 0.26
CD53P19397 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.65■□□□□ 0.26
CD53P19397 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD53P19397 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CD53P19397 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CD53P19397 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CD53P19397 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.64■□□□□ 0.25
CD53P19397 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.64■□□□□ 0.25
CD53P19397 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.64■□□□□ 0.25
CD53P19397 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CD53P19397 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CD53P19397 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.64■□□□□ 0.25
CD53P19397 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.64■□□□□ 0.25
CD53P19397 AC004951.3-201ENST00000418645 1148 ntBASIC16.64■□□□□ 0.25
CD53P19397 TSPY5P-201ENST00000426936 936 ntBASIC16.64■□□□□ 0.25
CD53P19397 MFAP1P1-201ENST00000442257 1255 ntBASIC16.64■□□□□ 0.25
CD53P19397 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.64■□□□□ 0.25
CD53P19397 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CD53P19397 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CD53P19397 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CD53P19397 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.64■□□□□ 0.25
CD53P19397 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CD53P19397 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.64■□□□□ 0.25
CD53P19397 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.64■□□□□ 0.25
CD53P19397 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.64■□□□□ 0.25
CD53P19397 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD53P19397 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.64■□□□□ 0.25
CD53P19397 AC096733.2-201ENST00000609937 1394 ntBASIC16.64■□□□□ 0.25
CD53P19397 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD53P19397 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD53P19397 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD53P19397 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms