Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.79■■□□□ 1.08
NCLP19338 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.79■■□□□ 1.08
NCLP19338 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.79■■□□□ 1.08
NCLP19338 MIR4497-201ENST00000583208 89 ntBASIC21.79■■□□□ 1.08
NCLP19338 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.79■■□□□ 1.08
NCLP19338 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.79■■□□□ 1.08
NCLP19338 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.78■■□□□ 1.08
NCLP19338 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
NCLP19338 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 AC012618.2-201ENST00000428058 849 ntBASIC21.78■■□□□ 1.08
NCLP19338 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.78■■□□□ 1.08
NCLP19338 C1QL1P1-201ENST00000568105 661 ntBASIC21.78■■□□□ 1.08
NCLP19338 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.78■■□□□ 1.08
NCLP19338 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.78■■□□□ 1.08
NCLP19338 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NCLP19338 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.78■■□□□ 1.08
NCLP19338 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC21.78■■□□□ 1.08
NCLP19338 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NCLP19338 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC21.77■■□□□ 1.08
NCLP19338 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NCLP19338 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
NCLP19338 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.77■■□□□ 1.08
NCLP19338 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.77■■□□□ 1.08
NCLP19338 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.77■■□□□ 1.08
NCLP19338 AC233702.5-201ENST00000584107 538 ntBASIC21.77■■□□□ 1.08
NCLP19338 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NCLP19338 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.77■■□□□ 1.08
NCLP19338 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NCLP19338 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.77■■□□□ 1.08
NCLP19338 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLP19338 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
NCLP19338 AL499627.1-201ENST00000569373 2188 ntBASIC21.77■■□□□ 1.07
NCLP19338 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.77■■□□□ 1.07
NCLP19338 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 AC134043.2-201ENST00000624206 2238 ntBASIC21.76■■□□□ 1.07
NCLP19338 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.76■■□□□ 1.07
NCLP19338 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NCLP19338 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NCLP19338 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NCLP19338 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NCLP19338 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NCLP19338 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.76■■□□□ 1.07
NCLP19338 RPS2P55-201ENST00000397318 883 ntBASIC21.76■■□□□ 1.07
NCLP19338 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NCLP19338 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.76■■□□□ 1.07
NCLP19338 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.76■■□□□ 1.07
NCLP19338 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.76■■□□□ 1.07
NCLP19338 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 AC107956.1-201ENST00000494359 873 ntBASIC21.76■■□□□ 1.07
NCLP19338 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NCLP19338 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 AC004264.1-201ENST00000608354 794 ntBASIC21.76■■□□□ 1.07
NCLP19338 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.76■■□□□ 1.07
NCLP19338 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.76■■□□□ 1.07
NCLP19338 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 NFIC-211ENST00000641145 8399 ntBASIC21.76■■□□□ 1.07
NCLP19338 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms