Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.55■□□□□ 0.88
CYP3A4P08684 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYP3A4P08684 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.55■□□□□ 0.88
CYP3A4P08684 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYP3A4P08684 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYP3A4P08684 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CYP3A4P08684 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.54■□□□□ 0.88
CYP3A4P08684 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CYP3A4P08684 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CYP3A4P08684 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.54■□□□□ 0.88
CYP3A4P08684 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.54■□□□□ 0.88
CYP3A4P08684 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.54■□□□□ 0.88
CYP3A4P08684 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.54■□□□□ 0.88
CYP3A4P08684 AL845331.1-201ENST00000424978 1190 ntBASIC20.54■□□□□ 0.88
CYP3A4P08684 KRT18P65-201ENST00000439811 1286 ntBASIC20.54■□□□□ 0.88
CYP3A4P08684 HCG4P8-203ENST00000443049 980 ntBASIC20.54■□□□□ 0.88
CYP3A4P08684 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.54■□□□□ 0.88
CYP3A4P08684 AC068472.1-201ENST00000474589 881 ntBASIC20.54■□□□□ 0.88
CYP3A4P08684 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CYP3A4P08684 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.54■□□□□ 0.88
CYP3A4P08684 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CYP3A4P08684 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.54■□□□□ 0.88
CYP3A4P08684 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CYP3A4P08684 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CYP3A4P08684 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP3A4P08684 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CYP3A4P08684 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.53■□□□□ 0.88
CYP3A4P08684 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.53■□□□□ 0.88
CYP3A4P08684 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CYP3A4P08684 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.53■□□□□ 0.88
CYP3A4P08684 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CYP3A4P08684 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.53■□□□□ 0.88
CYP3A4P08684 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.53■□□□□ 0.88
CYP3A4P08684 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.53■□□□□ 0.88
CYP3A4P08684 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CYP3A4P08684 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.53■□□□□ 0.88
CYP3A4P08684 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.53■□□□□ 0.88
CYP3A4P08684 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
CYP3A4P08684 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.53■□□□□ 0.88
CYP3A4P08684 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP3A4P08684 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.52■□□□□ 0.88
CYP3A4P08684 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.52■□□□□ 0.88
CYP3A4P08684 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.52■□□□□ 0.88
CYP3A4P08684 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.52■□□□□ 0.88
CYP3A4P08684 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CYP3A4P08684 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.52■□□□□ 0.88
CYP3A4P08684 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CYP3A4P08684 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.52■□□□□ 0.88
CYP3A4P08684 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.52■□□□□ 0.88
CYP3A4P08684 AC135776.1-201ENST00000319817 2481 ntBASIC20.52■□□□□ 0.88
CYP3A4P08684 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CYP3A4P08684 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CYP3A4P08684 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP3A4P08684 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms