Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DUX1O43812 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
DUX1O43812 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX1O43812 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
DUX1O43812 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 AL499627.1-201ENST00000569373 2188 ntBASIC17.53■□□□□ 0.4
DUX1O43812 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.53■□□□□ 0.4
DUX1O43812 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
DUX1O43812 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 NUS1P2-201ENST00000417358 873 ntBASIC17.53■□□□□ 0.4
DUX1O43812 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX1O43812 AP000347.1-202ENST00000435868 847 ntBASIC17.53■□□□□ 0.4
DUX1O43812 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.53■□□□□ 0.4
DUX1O43812 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.53■□□□□ 0.4
DUX1O43812 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.53■□□□□ 0.4
DUX1O43812 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX1O43812 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.53■□□□□ 0.4
DUX1O43812 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX1O43812 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX1O43812 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX1O43812 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
DUX1O43812 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX1O43812 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX1O43812 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.52■□□□□ 0.4
DUX1O43812 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DUX1O43812 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DUX1O43812 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX1O43812 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
DUX1O43812 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
DUX1O43812 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX1O43812 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.52■□□□□ 0.4
DUX1O43812 EMBP1-201ENST00000458200 901 ntBASIC17.52■□□□□ 0.4
DUX1O43812 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX1O43812 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DUX1O43812 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.52■□□□□ 0.4
DUX1O43812 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
DUX1O43812 AP005901.3-202ENST00000581653 237 ntBASIC17.52■□□□□ 0.4
DUX1O43812 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.52■□□□□ 0.4
DUX1O43812 KRT8P10-201ENST00000450021 1447 ntBASIC17.52■□□□□ 0.4
DUX1O43812 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
DUX1O43812 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.39
DUX1O43812 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.51■□□□□ 0.39
DUX1O43812 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
DUX1O43812 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.51■□□□□ 0.39
DUX1O43812 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.51■□□□□ 0.39
DUX1O43812 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.51■□□□□ 0.39
DUX1O43812 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.51■□□□□ 0.39
DUX1O43812 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.51■□□□□ 0.39
DUX1O43812 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.51■□□□□ 0.39
DUX1O43812 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.51■□□□□ 0.39
DUX1O43812 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.51■□□□□ 0.39
DUX1O43812 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DUX1O43812 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.51■□□□□ 0.39
DUX1O43812 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.51■□□□□ 0.39
DUX1O43812 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.51■□□□□ 0.39
DUX1O43812 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.51■□□□□ 0.39
DUX1O43812 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.51■□□□□ 0.39
DUX1O43812 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX1O43812 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DUX1O43812 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUX1O43812 ANO7L1-203ENST00000602586 1720 ntBASIC17.5■□□□□ 0.39
DUX1O43812 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DUX1O43812 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUX1O43812 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
DUX1O43812 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.5■□□□□ 0.39
DUX1O43812 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
DUX1O43812 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms