Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SPDYE15P-201ENST00000424157 909 ntBASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 RASA4DP-201ENST00000460726 1199 ntBASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 AL163051.1-201ENST00000569214 1512 ntBASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 WIZP1-201ENST00000531444 2299 ntBASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 BX276092.5-203ENST00000456199 560 ntBASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 MIR3180-4-201ENST00000582223 153 ntBASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 NPAP1P7-201ENST00000613027 823 ntBASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB9Q9Y5E1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 FAAHP1-202ENST00000446499 1238 ntBASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 AL138781.2-201ENST00000617896 1843 ntBASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB9Q9Y5E1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 FDX1P1-201ENST00000449115 551 ntBASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 AL121672.3-201ENST00000608644 468 ntBASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB9Q9Y5E1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 KRT8P10-201ENST00000450021 1447 ntBASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms