Protein–RNA interactions for Protein: Q9UHF7

TRPS1, Zinc finger transcription factor Trps1, humanhuman

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1Q9UHF7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 AL096828.2-201ENST00000567259 1965 ntBASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 PHGDH-209ENST00000641074 1780 ntBASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 MIR1238-201ENST00000408483 83 ntBASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 SNORA78-201ENST00000459373 127 ntBASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 AC009065.1-201ENST00000564055 1225 ntBASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 AC010653.2-201ENST00000623505 997 ntBASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRPS1Q9UHF7 KRT17P2-201ENST00000300992 1314 ntBASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 AL355075.4-201ENST00000554988 638 ntBASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 AC026471.1-201ENST00000564629 3026 ntBASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.73■□□□□ 0.43
TRPS1Q9UHF7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 TSPY14P-201ENST00000303979 915 ntBASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 MIR3180-4-201ENST00000582223 153 ntBASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRPS1Q9UHF7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms