Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 MIR149-201ENST00000384879 89 ntBASIC16.27■□□□□ 0.2
C12orf49Q9H741 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.27■□□□□ 0.2
C12orf49Q9H741 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf49Q9H741 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf49Q9H741 AC009102.3-201ENST00000623118 1491 ntBASIC16.27■□□□□ 0.19
C12orf49Q9H741 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf49Q9H741 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.27■□□□□ 0.19
C12orf49Q9H741 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 AC011498.5-201ENST00000592027 486 ntBASIC16.26■□□□□ 0.19
C12orf49Q9H741 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf49Q9H741 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
C12orf49Q9H741 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 MIR662-201ENST00000384847 95 ntBASIC16.25■□□□□ 0.19
C12orf49Q9H741 KRT18P48-201ENST00000434763 852 ntBASIC16.25■□□□□ 0.19
C12orf49Q9H741 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 AP003733.1-201ENST00000491725 852 ntBASIC16.25■□□□□ 0.19
C12orf49Q9H741 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 CROCCP3-202ENST00000420820 1947 ntBASIC16.25■□□□□ 0.19
C12orf49Q9H741 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
C12orf49Q9H741 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf49Q9H741 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
C12orf49Q9H741 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C12orf49Q9H741 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C12orf49Q9H741 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.24■□□□□ 0.19
C12orf49Q9H741 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C12orf49Q9H741 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms