Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.86■□□□□ 0.45
PKP4Q99569 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.86■□□□□ 0.45
PKP4Q99569 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.86■□□□□ 0.45
PKP4Q99569 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PKP4Q99569 KRT18P21-201ENST00000515767 1272 ntBASIC17.86■□□□□ 0.45
PKP4Q99569 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.86■□□□□ 0.45
PKP4Q99569 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.86■□□□□ 0.45
PKP4Q99569 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.86■□□□□ 0.45
PKP4Q99569 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PKP4Q99569 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.86■□□□□ 0.45
PKP4Q99569 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.86■□□□□ 0.45
PKP4Q99569 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
PKP4Q99569 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PKP4Q99569 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.86■□□□□ 0.45
PKP4Q99569 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.86■□□□□ 0.45
PKP4Q99569 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.86■□□□□ 0.45
PKP4Q99569 BICD1-207ENST00000551848 1962 ntBASIC17.86■□□□□ 0.45
PKP4Q99569 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.86■□□□□ 0.45
PKP4Q99569 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PKP4Q99569 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PKP4Q99569 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.85■□□□□ 0.45
PKP4Q99569 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.85■□□□□ 0.45
PKP4Q99569 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 RNF152P1-201ENST00000397754 604 ntBASIC17.85■□□□□ 0.45
PKP4Q99569 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 AK4P3-201ENST00000418260 669 ntBASIC17.85■□□□□ 0.45
PKP4Q99569 TMPOP1-202ENST00000424642 1267 ntBASIC17.85■□□□□ 0.45
PKP4Q99569 TSPY5P-201ENST00000426936 936 ntBASIC17.85■□□□□ 0.45
PKP4Q99569 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.85■□□□□ 0.45
PKP4Q99569 GMCL1P1-201ENST00000463439 1581 ntBASIC17.85■□□□□ 0.45
PKP4Q99569 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.85■□□□□ 0.45
PKP4Q99569 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.85■□□□□ 0.45
PKP4Q99569 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.85■□□□□ 0.45
PKP4Q99569 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.85■□□□□ 0.45
PKP4Q99569 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PKP4Q99569 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKP4Q99569 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PKP4Q99569 AC135776.1-201ENST00000319817 2481 ntBASIC17.84■□□□□ 0.45
PKP4Q99569 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PKP4Q99569 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PKP4Q99569 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PKP4Q99569 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
PKP4Q99569 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PKP4Q99569 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.84■□□□□ 0.45
PKP4Q99569 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.84■□□□□ 0.45
PKP4Q99569 RASA4DP-201ENST00000460726 1199 ntBASIC17.84■□□□□ 0.45
PKP4Q99569 AC034232.1-201ENST00000506026 1064 ntBASIC17.84■□□□□ 0.45
PKP4Q99569 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.84■□□□□ 0.45
PKP4Q99569 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.84■□□□□ 0.45
PKP4Q99569 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.84■□□□□ 0.45
PKP4Q99569 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PKP4Q99569 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
PKP4Q99569 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.84■□□□□ 0.45
PKP4Q99569 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKP4Q99569 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms