Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 HTR7P1-201ENST00000538670 1336 ntBASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 AL353807.1-201ENST00000427475 662 ntBASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 KSR1P1-201ENST00000446298 240 ntBASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 MIR4651-201ENST00000582622 73 ntBASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 AC012317.2-201ENST00000623305 2251 ntBASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 MYLKP1-201ENST00000509077 1580 ntBASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SLC47A1Q96FL8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 FAM201B-201ENST00000458407 597 ntBASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 RPPH1-201ENST00000516869 333 ntBASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC47A1Q96FL8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC47A1Q96FL8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms