Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AC093458.2-201ENST00000623150 629 ntBASIC21.58■■□□□ 1.05
STAG1Q8WVM7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
STAG1Q8WVM7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.58■■□□□ 1.04
STAG1Q8WVM7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
STAG1Q8WVM7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
STAG1Q8WVM7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
STAG1Q8WVM7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
STAG1Q8WVM7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 AC005332.3-201ENST00000589904 676 ntBASIC21.56■■□□□ 1.04
STAG1Q8WVM7 AC011498.5-201ENST00000592027 486 ntBASIC21.56■■□□□ 1.04
STAG1Q8WVM7 AL390719.2-201ENST00000606993 987 ntBASIC21.56■■□□□ 1.04
STAG1Q8WVM7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
STAG1Q8WVM7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 GPR32P1-201ENST00000601788 811 ntBASIC21.55■■□□□ 1.04
STAG1Q8WVM7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 AC093677.2-201ENST00000600169 1863 ntBASIC21.55■■□□□ 1.04
STAG1Q8WVM7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
STAG1Q8WVM7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 PHGDH-209ENST00000641074 1780 ntBASIC21.54■■□□□ 1.04
STAG1Q8WVM7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms