Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 MFAP1P1-201ENST00000442257 1255 ntBASIC17.4■□□□□ 0.38
CHDHQ8NE62 AL355355.2-201ENST00000442321 338 ntBASIC17.4■□□□□ 0.38
CHDHQ8NE62 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 AC026471.5-201ENST00000615068 467 ntBASIC17.4■□□□□ 0.38
CHDHQ8NE62 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.4■□□□□ 0.38
CHDHQ8NE62 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHDHQ8NE62 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.39■□□□□ 0.38
CHDHQ8NE62 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.39■□□□□ 0.38
CHDHQ8NE62 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHDHQ8NE62 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHDHQ8NE62 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHDHQ8NE62 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHDHQ8NE62 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHDHQ8NE62 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHDHQ8NE62 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHDHQ8NE62 AC097488.1-201ENST00000507834 756 ntBASIC17.39■□□□□ 0.37
CHDHQ8NE62 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 SLC25A1P4-201ENST00000567977 778 ntBASIC17.39■□□□□ 0.37
CHDHQ8NE62 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHDHQ8NE62 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHDHQ8NE62 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CHDHQ8NE62 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHDHQ8NE62 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHDHQ8NE62 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 RCC2P3-201ENST00000418112 1537 ntBASIC17.38■□□□□ 0.37
CHDHQ8NE62 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 AC134043.2-201ENST00000624206 2238 ntBASIC17.38■□□□□ 0.37
CHDHQ8NE62 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 CA15P1-201ENST00000481698 905 ntBASIC17.38■□□□□ 0.37
CHDHQ8NE62 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
CHDHQ8NE62 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHDHQ8NE62 GNAS-203ENST00000306120 1878 ntBASIC17.37■□□□□ 0.37
CHDHQ8NE62 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHDHQ8NE62 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHDHQ8NE62 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms