Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 AC008894.3-201ENST00000624324 3103 ntBASIC17.32■□□□□ 0.36
PSD4Q8NDX1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSD4Q8NDX1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 AC063952.2-201ENST00000498792 1227 ntBASIC17.31■□□□□ 0.36
PSD4Q8NDX1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 NTF6B-201ENST00000591913 560 ntBASIC17.31■□□□□ 0.36
PSD4Q8NDX1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 AC008622.2-201ENST00000617006 1229 ntBASIC17.31■□□□□ 0.36
PSD4Q8NDX1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSD4Q8NDX1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 AP000523.1-201ENST00000398242 1049 ntBASIC17.3■□□□□ 0.36
PSD4Q8NDX1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PSD4Q8NDX1 WIZP1-201ENST00000531444 2299 ntBASIC17.3■□□□□ 0.36
PSD4Q8NDX1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 TSPY5P-201ENST00000426936 936 ntBASIC17.29■□□□□ 0.36
PSD4Q8NDX1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 AC140113.3-201ENST00000605663 199 ntBASIC17.29■□□□□ 0.36
PSD4Q8NDX1 AL023973.1-201ENST00000624619 620 ntBASIC17.29■□□□□ 0.36
PSD4Q8NDX1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.29■□□□□ 0.36
PSD4Q8NDX1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms