Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 Z69720.1-201ENST00000601483 472 ntBASIC18.66■□□□□ 0.58
CHPFQ8IZ52 AC138894.3-201ENST00000603787 634 ntBASIC18.66■□□□□ 0.58
CHPFQ8IZ52 AL592071.1-201ENST00000611956 408 ntBASIC18.66■□□□□ 0.58
CHPFQ8IZ52 AC124864.1-201ENST00000623408 392 ntBASIC18.66■□□□□ 0.58
CHPFQ8IZ52 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 AC233702.3-201ENST00000578656 1387 ntBASIC18.66■□□□□ 0.58
CHPFQ8IZ52 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.66■□□□□ 0.58
CHPFQ8IZ52 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 AP000593.1-201ENST00000393668 712 ntBASIC18.65■□□□□ 0.58
CHPFQ8IZ52 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 AL353692.3-201ENST00000407031 1396 ntBASIC18.65■□□□□ 0.58
CHPFQ8IZ52 AL161938.1-201ENST00000569833 2180 ntBASIC18.65■□□□□ 0.58
CHPFQ8IZ52 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHPFQ8IZ52 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CHPFQ8IZ52 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHPFQ8IZ52 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 EMBP1-201ENST00000458200 901 ntBASIC18.64■□□□□ 0.57
CHPFQ8IZ52 KRT18P31-201ENST00000506277 1292 ntBASIC18.64■□□□□ 0.57
CHPFQ8IZ52 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 AL163051.1-201ENST00000569214 1512 ntBASIC18.64■□□□□ 0.57
CHPFQ8IZ52 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHPFQ8IZ52 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 KRT17P6-201ENST00000453795 1220 ntBASIC18.63■□□□□ 0.57
CHPFQ8IZ52 VENTXP7-201ENST00000475503 772 ntBASIC18.63■□□□□ 0.57
CHPFQ8IZ52 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 AC099336.1-202ENST00000602961 463 ntBASIC18.63■□□□□ 0.57
CHPFQ8IZ52 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 KRT8P10-201ENST00000450021 1447 ntBASIC18.63■□□□□ 0.57
CHPFQ8IZ52 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms