Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 NTF6B-201ENST00000591913 560 ntBASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 HYMAI.1-201ENST00000620949 238 ntBASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.29■□□□□ 0.68
SCUBE3Q8IX30 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 AL391807.1-203ENST00000604392 2365 ntBASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 LINC01238-205ENST00000567549 1107 ntBASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 AC135776.1-201ENST00000319817 2481 ntBASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCUBE3Q8IX30 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 LINC01126-201ENST00000623515 1646 ntBASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCUBE3Q8IX30 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 GMCL1P1-201ENST00000463439 1581 ntBASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 RNF165-205ENST00000588679 2904 ntBASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCUBE3Q8IX30 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 HBZP1-201ENST00000354915 429 ntBASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCUBE3Q8IX30 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms