Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 AC009065.1-201ENST00000564055 1225 ntBASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 NTF6B-201ENST00000591913 560 ntBASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 SDHAP2-201ENST00000455183 2001 ntBASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 AC090164.3-201ENST00000610780 2143 ntBASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD3Q7Z3D4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 FAM8A6P-201ENST00000407496 1135 ntBASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD3Q7Z3D4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 AC079602.3-201ENST00000623931 403 ntBASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms