Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 AC104076.2-201ENST00000448912 469 ntBASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 AC079602.3-201ENST00000623931 403 ntBASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 AL096828.2-201ENST00000567259 1965 ntBASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN20Q4JDL3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 PVRIG2P-201ENST00000435460 978 ntBASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 KRT18P38-201ENST00000449496 1282 ntBASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 AC034232.1-201ENST00000506026 1064 ntBASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN20Q4JDL3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 REXO1L9P-201ENST00000604264 2108 ntBASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 RNF152P1-201ENST00000397754 604 ntBASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 STARP1-201ENST00000397973 869 ntBASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 AK4P3-201ENST00000418260 669 ntBASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 TSPY5P-201ENST00000426936 936 ntBASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN20Q4JDL3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms