Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.28■□□□□ 0.68
SKOR1P84550 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.28■□□□□ 0.68
SKOR1P84550 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SKOR1P84550 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.28■□□□□ 0.68
SKOR1P84550 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SKOR1P84550 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SKOR1P84550 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SKOR1P84550 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SKOR1P84550 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
SKOR1P84550 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SKOR1P84550 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
SKOR1P84550 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.27■□□□□ 0.68
SKOR1P84550 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.27■□□□□ 0.68
SKOR1P84550 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.27■□□□□ 0.68
SKOR1P84550 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.27■□□□□ 0.68
SKOR1P84550 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.27■□□□□ 0.68
SKOR1P84550 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SKOR1P84550 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.27■□□□□ 0.68
SKOR1P84550 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.27■□□□□ 0.68
SKOR1P84550 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SKOR1P84550 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SKOR1P84550 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SKOR1P84550 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SKOR1P84550 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SKOR1P84550 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SKOR1P84550 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SKOR1P84550 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SKOR1P84550 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.27■□□□□ 0.67
SKOR1P84550 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SKOR1P84550 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.26■□□□□ 0.67
SKOR1P84550 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKOR1P84550 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKOR1P84550 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SKOR1P84550 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SKOR1P84550 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKOR1P84550 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKOR1P84550 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SKOR1P84550 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.26■□□□□ 0.67
SKOR1P84550 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.26■□□□□ 0.67
SKOR1P84550 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.26■□□□□ 0.67
SKOR1P84550 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.26■□□□□ 0.67
SKOR1P84550 CKBP1-201ENST00000565489 1086 ntBASIC19.26■□□□□ 0.67
SKOR1P84550 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.26■□□□□ 0.67
SKOR1P84550 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.26■□□□□ 0.67
SKOR1P84550 DGCR10-201ENST00000609839 495 ntBASIC19.26■□□□□ 0.67
SKOR1P84550 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.26■□□□□ 0.67
SKOR1P84550 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.26■□□□□ 0.67
SKOR1P84550 AC084018.2-201ENST00000613093 2607 ntBASIC19.26■□□□□ 0.67
SKOR1P84550 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.26■□□□□ 0.67
SKOR1P84550 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.26■□□□□ 0.67
SKOR1P84550 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKOR1P84550 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKOR1P84550 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKOR1P84550 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.26■□□□□ 0.67
SKOR1P84550 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.26■□□□□ 0.67
SKOR1P84550 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SKOR1P84550 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SKOR1P84550 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SKOR1P84550 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SKOR1P84550 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SKOR1P84550 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SKOR1P84550 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SKOR1P84550 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.25■□□□□ 0.67
SKOR1P84550 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.25■□□□□ 0.67
SKOR1P84550 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SKOR1P84550 AL445228.2-201ENST00000605589 952 ntBASIC19.25■□□□□ 0.67
SKOR1P84550 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.25■□□□□ 0.67
SKOR1P84550 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SKOR1P84550 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKOR1P84550 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SKOR1P84550 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKOR1P84550 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms