Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AC009053.2-201ENST00000563701 2365 ntBASIC15.14■□□□□ 0.01
SRPXP78539 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRPXP78539 AL096828.2-201ENST00000567259 1965 ntBASIC15.14■□□□□ 0.01
SRPXP78539 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRPXP78539 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRPXP78539 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRPXP78539 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRPXP78539 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRPXP78539 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.14■□□□□ 0.01
SRPXP78539 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRPXP78539 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRPXP78539 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.13■□□□□ 0.01
SRPXP78539 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SRPXP78539 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SRPXP78539 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.13■□□□□ 0.01
SRPXP78539 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SRPXP78539 AC026185.1-201ENST00000445748 174 ntBASIC15.13■□□□□ 0.01
SRPXP78539 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.13■□□□□ 0.01
SRPXP78539 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.13■□□□□ 0.01
SRPXP78539 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SRPXP78539 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.13■□□□□ 0.01
SRPXP78539 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SRPXP78539 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.13■□□□□ 0.01
SRPXP78539 AL645608.8-201ENST00000606034 2086 ntBASIC15.13■□□□□ 0.01
SRPXP78539 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SRPXP78539 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.13■□□□□ 0.01
SRPXP78539 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.13■□□□□ 0.01
SRPXP78539 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRPXP78539 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.13■□□□□ 0.01
SRPXP78539 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.13■□□□□ 0.01
SRPXP78539 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SRPXP78539 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SRPXP78539 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SRPXP78539 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.12■□□□□ 0.01
SRPXP78539 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 MYC-209ENST00000641252 345 ntBASIC15.12■□□□□ 0.01
SRPXP78539 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.12■□□□□ 0.01
SRPXP78539 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SRPXP78539 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SRPXP78539 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.12■□□□□ 0.01
SRPXP78539 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRPXP78539 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRPXP78539 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SRPXP78539 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SRPXP78539 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRPXP78539 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRPXP78539 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SRPXP78539 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRPXP78539 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRPXP78539 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.11■□□□□ 0.01
SRPXP78539 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms