Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRIM2P49643 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRIM2P49643 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PRIM2P49643 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRIM2P49643 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PRIM2P49643 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PRIM2P49643 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRIM2P49643 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.49■□□□□ 0.39
PRIM2P49643 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRIM2P49643 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRIM2P49643 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRIM2P49643 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.49■□□□□ 0.39
PRIM2P49643 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.49■□□□□ 0.39
PRIM2P49643 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PRIM2P49643 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.48■□□□□ 0.39
PRIM2P49643 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.48■□□□□ 0.39
PRIM2P49643 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.48■□□□□ 0.39
PRIM2P49643 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PRIM2P49643 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.48■□□□□ 0.39
PRIM2P49643 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.48■□□□□ 0.39
PRIM2P49643 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.48■□□□□ 0.39
PRIM2P49643 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.48■□□□□ 0.39
PRIM2P49643 AP003071.4-201ENST00000562276 1284 ntBASIC17.48■□□□□ 0.39
PRIM2P49643 NOC2LP2-201ENST00000407594 1944 ntBASIC17.48■□□□□ 0.39
PRIM2P49643 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRIM2P49643 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.48■□□□□ 0.39
PRIM2P49643 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.48■□□□□ 0.39
PRIM2P49643 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.48■□□□□ 0.39
PRIM2P49643 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRIM2P49643 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 AP000997.3-201ENST00000623333 2250 ntBASIC17.47■□□□□ 0.39
PRIM2P49643 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.47■□□□□ 0.39
PRIM2P49643 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.47■□□□□ 0.39
PRIM2P49643 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.47■□□□□ 0.39
PRIM2P49643 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.47■□□□□ 0.39
PRIM2P49643 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.47■□□□□ 0.39
PRIM2P49643 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.47■□□□□ 0.39
PRIM2P49643 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
PRIM2P49643 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRIM2P49643 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.47■□□□□ 0.39
PRIM2P49643 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PRIM2P49643 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRIM2P49643 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.46■□□□□ 0.39
PRIM2P49643 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PRIM2P49643 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 UNC93B2-201ENST00000285383 730 ntBASIC17.46■□□□□ 0.39
PRIM2P49643 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.46■□□□□ 0.39
PRIM2P49643 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.46■□□□□ 0.39
PRIM2P49643 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PRIM2P49643 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 AP005242.2-201ENST00000580065 1175 ntBASIC17.46■□□□□ 0.39
PRIM2P49643 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PRIM2P49643 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
PRIM2P49643 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PRIM2P49643 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
PRIM2P49643 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PRIM2P49643 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRIM2P49643 KRT8P45-201ENST00000414328 1447 ntBASIC17.46■□□□□ 0.39
PRIM2P49643 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRIM2P49643 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms