Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.35■□□□□ 0.37
GABRA4P48169 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.35■□□□□ 0.37
GABRA4P48169 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.35■□□□□ 0.37
GABRA4P48169 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.35■□□□□ 0.37
GABRA4P48169 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GABRA4P48169 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABRA4P48169 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.34■□□□□ 0.37
GABRA4P48169 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.34■□□□□ 0.37
GABRA4P48169 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
GABRA4P48169 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GABRA4P48169 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.34■□□□□ 0.37
GABRA4P48169 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.34■□□□□ 0.37
GABRA4P48169 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 TOB2P1-201ENST00000469761 992 ntBASIC17.34■□□□□ 0.37
GABRA4P48169 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.34■□□□□ 0.37
GABRA4P48169 TNXA-203ENST00000507684 2038 ntBASIC17.34■□□□□ 0.37
GABRA4P48169 GUSBP12-201ENST00000513727 720 ntBASIC17.34■□□□□ 0.37
GABRA4P48169 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.34■□□□□ 0.37
GABRA4P48169 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.34■□□□□ 0.37
GABRA4P48169 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 KRT126P-201ENST00000549467 1181 ntBASIC17.34■□□□□ 0.37
GABRA4P48169 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.34■□□□□ 0.37
GABRA4P48169 AL353801.3-201ENST00000609898 542 ntBASIC17.34■□□□□ 0.37
GABRA4P48169 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.34■□□□□ 0.37
GABRA4P48169 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.34■□□□□ 0.37
GABRA4P48169 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.34■□□□□ 0.37
GABRA4P48169 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABRA4P48169 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GABRA4P48169 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
GABRA4P48169 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GABRA4P48169 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GABRA4P48169 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GABRA4P48169 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
GABRA4P48169 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GABRA4P48169 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.33■□□□□ 0.37
GABRA4P48169 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.33■□□□□ 0.37
GABRA4P48169 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GABRA4P48169 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
GABRA4P48169 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.33■□□□□ 0.37
GABRA4P48169 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.33■□□□□ 0.37
GABRA4P48169 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GABRA4P48169 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GABRA4P48169 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GABRA4P48169 LINC00167-201ENST00000530583 1419 ntBASIC17.33■□□□□ 0.36
GABRA4P48169 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.33■□□□□ 0.36
GABRA4P48169 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GABRA4P48169 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
GABRA4P48169 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.33■□□□□ 0.36
GABRA4P48169 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.33■□□□□ 0.36
GABRA4P48169 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.33■□□□□ 0.36
GABRA4P48169 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GABRA4P48169 AC124864.1-201ENST00000623408 392 ntBASIC17.33■□□□□ 0.36
GABRA4P48169 AC093503.3-201ENST00000624917 2352 ntBASIC17.33■□□□□ 0.36
GABRA4P48169 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GABRA4P48169 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GABRA4P48169 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GABRA4P48169 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GABRA4P48169 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GABRA4P48169 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GABRA4P48169 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.33■□□□□ 0.36
GABRA4P48169 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GABRA4P48169 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GABRA4P48169 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.32■□□□□ 0.36
GABRA4P48169 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 AC233702.3-201ENST00000578656 1387 ntBASIC17.32■□□□□ 0.36
GABRA4P48169 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GABRA4P48169 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms