Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 MIR662-201ENST00000384847 95 ntBASIC18.27■□□□□ 0.52
HTR1BP28222 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HTR1BP28222 AP000593.1-201ENST00000393668 712 ntBASIC18.27■□□□□ 0.52
HTR1BP28222 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HTR1BP28222 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.27■□□□□ 0.52
HTR1BP28222 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.27■□□□□ 0.52
HTR1BP28222 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.27■□□□□ 0.52
HTR1BP28222 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HTR1BP28222 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.27■□□□□ 0.52
HTR1BP28222 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
HTR1BP28222 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1BP28222 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
HTR1BP28222 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.27■□□□□ 0.51
HTR1BP28222 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1BP28222 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.27■□□□□ 0.51
HTR1BP28222 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1BP28222 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
HTR1BP28222 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1BP28222 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1BP28222 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1BP28222 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
HTR1BP28222 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1BP28222 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.26■□□□□ 0.51
HTR1BP28222 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.26■□□□□ 0.51
HTR1BP28222 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
HTR1BP28222 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1BP28222 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1BP28222 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1BP28222 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1BP28222 AC093525.10-201ENST00000625130 1569 ntBASIC18.25■□□□□ 0.51
HTR1BP28222 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
HTR1BP28222 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.25■□□□□ 0.51
HTR1BP28222 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.25■□□□□ 0.51
HTR1BP28222 ATP5G2P1-201ENST00000433580 426 ntBASIC18.25■□□□□ 0.51
HTR1BP28222 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.25■□□□□ 0.51
HTR1BP28222 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.25■□□□□ 0.51
HTR1BP28222 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.25■□□□□ 0.51
HTR1BP28222 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.25■□□□□ 0.51
HTR1BP28222 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HTR1BP28222 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.25■□□□□ 0.51
HTR1BP28222 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HTR1BP28222 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1BP28222 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HTR1BP28222 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1BP28222 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1BP28222 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.24■□□□□ 0.51
HTR1BP28222 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1BP28222 MTMR9LP-203ENST00000426597 1545 ntBASIC18.24■□□□□ 0.51
HTR1BP28222 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1BP28222 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HTR1BP28222 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1BP28222 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HTR1BP28222 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HTR1BP28222 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
HTR1BP28222 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1BP28222 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1BP28222 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.24■□□□□ 0.51
HTR1BP28222 TSSC2-201ENST00000450217 709 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms