Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.33■□□□□ 0.68
LCP1P13796 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LCP1P13796 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
LCP1P13796 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.32■□□□□ 0.68
LCP1P13796 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LCP1P13796 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.32■□□□□ 0.68
LCP1P13796 PVRIG2P-201ENST00000435460 978 ntBASIC19.32■□□□□ 0.68
LCP1P13796 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.32■□□□□ 0.68
LCP1P13796 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
LCP1P13796 AL445228.2-201ENST00000605589 952 ntBASIC19.32■□□□□ 0.68
LCP1P13796 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
LCP1P13796 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.32■□□□□ 0.68
LCP1P13796 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.32■□□□□ 0.68
LCP1P13796 HYMAI.1-201ENST00000620949 238 ntBASIC19.32■□□□□ 0.68
LCP1P13796 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.32■□□□□ 0.68
LCP1P13796 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.32■□□□□ 0.68
LCP1P13796 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.32■□□□□ 0.68
LCP1P13796 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.32■□□□□ 0.68
LCP1P13796 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LCP1P13796 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LCP1P13796 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.32■□□□□ 0.68
LCP1P13796 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCP1P13796 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LCP1P13796 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
LCP1P13796 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 ARMC10P1-201ENST00000313754 855 ntBASIC19.31■□□□□ 0.68
LCP1P13796 HBZP1-201ENST00000354915 429 ntBASIC19.31■□□□□ 0.68
LCP1P13796 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.31■□□□□ 0.68
LCP1P13796 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.31■□□□□ 0.68
LCP1P13796 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.31■□□□□ 0.68
LCP1P13796 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.31■□□□□ 0.68
LCP1P13796 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
LCP1P13796 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.31■□□□□ 0.68
LCP1P13796 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCP1P13796 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.31■□□□□ 0.68
LCP1P13796 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
LCP1P13796 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.3■□□□□ 0.68
LCP1P13796 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.3■□□□□ 0.68
LCP1P13796 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 AL031133.1-201ENST00000406807 723 ntBASIC19.3■□□□□ 0.68
LCP1P13796 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.3■□□□□ 0.68
LCP1P13796 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.3■□□□□ 0.68
LCP1P13796 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.3■□□□□ 0.68
LCP1P13796 AC083849.1-201ENST00000615227 514 ntBASIC19.3■□□□□ 0.68
LCP1P13796 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
LCP1P13796 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCP1P13796 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.29■□□□□ 0.68
LCP1P13796 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCP1P13796 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LCP1P13796 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.29■□□□□ 0.68
LCP1P13796 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LCP1P13796 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCP1P13796 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms