Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND3P03897 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND3P03897 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.72■□□□□ 0.59
MT-ND3P03897 KRT8P32-201ENST00000512863 1461 ntBASIC18.72■□□□□ 0.59
MT-ND3P03897 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.72■□□□□ 0.59
MT-ND3P03897 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
MT-ND3P03897 MIR1224-201ENST00000408193 85 ntBASIC18.72■□□□□ 0.59
MT-ND3P03897 NIFKP9-201ENST00000419265 221 ntBASIC18.72■□□□□ 0.59
MT-ND3P03897 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.72■□□□□ 0.59
MT-ND3P03897 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.72■□□□□ 0.59
MT-ND3P03897 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND3P03897 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.72■□□□□ 0.59
MT-ND3P03897 AC012306.2-201ENST00000609350 630 ntBASIC18.72■□□□□ 0.59
MT-ND3P03897 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MT-ND3P03897 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.72■□□□□ 0.59
MT-ND3P03897 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND3P03897 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MT-ND3P03897 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND3P03897 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND3P03897 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND3P03897 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MT-ND3P03897 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
MT-ND3P03897 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MT-ND3P03897 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND3P03897 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND3P03897 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.71■□□□□ 0.59
MT-ND3P03897 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.71■□□□□ 0.59
MT-ND3P03897 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND3P03897 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND3P03897 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND3P03897 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND3P03897 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND3P03897 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
MT-ND3P03897 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.71■□□□□ 0.58
MT-ND3P03897 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
MT-ND3P03897 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 GNAS-203ENST00000306120 1878 ntBASIC18.7■□□□□ 0.58
MT-ND3P03897 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
MT-ND3P03897 KRT16P1-201ENST00000399124 1418 ntBASIC18.7■□□□□ 0.58
MT-ND3P03897 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND3P03897 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND3P03897 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND3P03897 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND3P03897 KRT18P21-201ENST00000515767 1272 ntBASIC18.7■□□□□ 0.58
MT-ND3P03897 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MT-ND3P03897 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND3P03897 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND3P03897 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND3P03897 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
MT-ND3P03897 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND3P03897 AL357033.4-201ENST00000617703 1807 ntBASIC18.7■□□□□ 0.58
MT-ND3P03897 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND3P03897 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-ND3P03897 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND3P03897 AC093677.2-201ENST00000600169 1863 ntBASIC18.69■□□□□ 0.58
MT-ND3P03897 AC134043.2-201ENST00000624206 2238 ntBASIC18.69■□□□□ 0.58
MT-ND3P03897 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.69■□□□□ 0.58
MT-ND3P03897 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms