Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.21■□□□□ 0.51
SUPT3HO75486 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.21■□□□□ 0.51
SUPT3HO75486 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.21■□□□□ 0.51
SUPT3HO75486 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SUPT3HO75486 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.21■□□□□ 0.51
SUPT3HO75486 CRYGFP-201ENST00000418459 633 ntBASIC18.21■□□□□ 0.51
SUPT3HO75486 AL355355.2-201ENST00000442321 338 ntBASIC18.21■□□□□ 0.51
SUPT3HO75486 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.21■□□□□ 0.51
SUPT3HO75486 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SUPT3HO75486 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.21■□□□□ 0.51
SUPT3HO75486 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.21■□□□□ 0.51
SUPT3HO75486 REXO1L10P-201ENST00000615707 1290 ntBASIC18.21■□□□□ 0.51
SUPT3HO75486 REXO1L12P-201ENST00000622156 912 ntBASIC18.21■□□□□ 0.51
SUPT3HO75486 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.21■□□□□ 0.51
SUPT3HO75486 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SUPT3HO75486 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.21■□□□□ 0.51
SUPT3HO75486 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
SUPT3HO75486 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SUPT3HO75486 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SUPT3HO75486 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SUPT3HO75486 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
SUPT3HO75486 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
SUPT3HO75486 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SUPT3HO75486 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.2■□□□□ 0.5
SUPT3HO75486 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.2■□□□□ 0.5
SUPT3HO75486 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.2■□□□□ 0.5
SUPT3HO75486 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.2■□□□□ 0.5
SUPT3HO75486 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.2■□□□□ 0.5
SUPT3HO75486 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.2■□□□□ 0.5
SUPT3HO75486 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SUPT3HO75486 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.2■□□□□ 0.5
SUPT3HO75486 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SUPT3HO75486 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SUPT3HO75486 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SUPT3HO75486 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SUPT3HO75486 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.19■□□□□ 0.5
SUPT3HO75486 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.19■□□□□ 0.5
SUPT3HO75486 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.19■□□□□ 0.5
SUPT3HO75486 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SUPT3HO75486 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 AC135776.1-201ENST00000319817 2481 ntBASIC18.19■□□□□ 0.5
SUPT3HO75486 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SUPT3HO75486 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.19■□□□□ 0.5
SUPT3HO75486 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.19■□□□□ 0.5
SUPT3HO75486 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.19■□□□□ 0.5
SUPT3HO75486 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.19■□□□□ 0.5
SUPT3HO75486 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SUPT3HO75486 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SUPT3HO75486 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SUPT3HO75486 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.18■□□□□ 0.5
SUPT3HO75486 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SUPT3HO75486 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.18■□□□□ 0.5
SUPT3HO75486 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.18■□□□□ 0.5
SUPT3HO75486 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.18■□□□□ 0.5
SUPT3HO75486 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.18■□□□□ 0.5
SUPT3HO75486 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
SUPT3HO75486 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms