Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF13O43567 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF13O43567 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF13O43567 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF13O43567 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF13O43567 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF13O43567 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF13O43567 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RNF13O43567 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF13O43567 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF13O43567 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF13O43567 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 GPAT2P1-201ENST00000444924 1672 ntBASIC16.73■□□□□ 0.27
RNF13O43567 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 AL023284.2-201ENST00000405850 579 ntBASIC16.73■□□□□ 0.27
RNF13O43567 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RNF13O43567 RBM17P1-201ENST00000453646 1190 ntBASIC16.73■□□□□ 0.27
RNF13O43567 SNORA78-201ENST00000459373 127 ntBASIC16.73■□□□□ 0.27
RNF13O43567 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.73■□□□□ 0.27
RNF13O43567 AP005242.2-201ENST00000580065 1175 ntBASIC16.73■□□□□ 0.27
RNF13O43567 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF13O43567 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF13O43567 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF13O43567 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
RNF13O43567 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RNF13O43567 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF13O43567 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RNF13O43567 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF13O43567 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RNF13O43567 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF13O43567 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF13O43567 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF13O43567 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF13O43567 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF13O43567 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF13O43567 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RNF13O43567 KRT17P2-201ENST00000300992 1314 ntBASIC16.72■□□□□ 0.27
RNF13O43567 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF13O43567 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF13O43567 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF13O43567 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF13O43567 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF13O43567 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF13O43567 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RNF13O43567 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF13O43567 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RNF13O43567 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
RNF13O43567 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF13O43567 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF13O43567 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF13O43567 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF13O43567 KRT8P45-201ENST00000414328 1447 ntBASIC16.71■□□□□ 0.27
RNF13O43567 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF13O43567 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF13O43567 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF13O43567 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF13O43567 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF13O43567 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF13O43567 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF13O43567 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF13O43567 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF13O43567 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF13O43567 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RNF13O43567 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF13O43567 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF13O43567 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNF13O43567 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms