Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.24■□□□□ 0.19
SGCEO43556 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.24■□□□□ 0.19
SGCEO43556 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.24■□□□□ 0.19
SGCEO43556 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SGCEO43556 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGCEO43556 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
SGCEO43556 MYLKP1-201ENST00000509077 1580 ntBASIC16.24■□□□□ 0.19
SGCEO43556 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.24■□□□□ 0.19
SGCEO43556 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGCEO43556 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGCEO43556 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.24■□□□□ 0.19
SGCEO43556 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.24■□□□□ 0.19
SGCEO43556 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SGCEO43556 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGCEO43556 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SGCEO43556 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGCEO43556 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGCEO43556 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
SGCEO43556 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGCEO43556 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SGCEO43556 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGCEO43556 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SGCEO43556 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.23■□□□□ 0.19
SGCEO43556 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SGCEO43556 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.23■□□□□ 0.19
SGCEO43556 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.23■□□□□ 0.19
SGCEO43556 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
SGCEO43556 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 AC010947.1-201ENST00000623454 693 ntBASIC16.23■□□□□ 0.19
SGCEO43556 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SGCEO43556 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.23■□□□□ 0.19
SGCEO43556 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SGCEO43556 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
SGCEO43556 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.23■□□□□ 0.19
SGCEO43556 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.22■□□□□ 0.19
SGCEO43556 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SGCEO43556 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.22■□□□□ 0.19
SGCEO43556 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.22■□□□□ 0.19
SGCEO43556 WWOX-216ENST00000569818 525 ntBASIC16.22■□□□□ 0.19
SGCEO43556 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 CR769767.2-201ENST00000622735 460 ntBASIC16.22■□□□□ 0.19
SGCEO43556 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 PCDHB18P-201ENST00000524813 2368 ntBASIC16.22■□□□□ 0.19
SGCEO43556 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.22■□□□□ 0.19
SGCEO43556 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SGCEO43556 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SGCEO43556 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.21■□□□□ 0.19
SGCEO43556 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SGCEO43556 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGCEO43556 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGCEO43556 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.21■□□□□ 0.19
SGCEO43556 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SGCEO43556 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.21■□□□□ 0.19
SGCEO43556 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGCEO43556 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SGCEO43556 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGCEO43556 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGCEO43556 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SGCEO43556 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGCEO43556 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SGCEO43556 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.21■□□□□ 0.19
SGCEO43556 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.21■□□□□ 0.19
SGCEO43556 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms