Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR3180-5-201ENST00000583743 153 ntBASIC18.28■□□□□ 0.52
PHGDHO43175 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.28■□□□□ 0.52
PHGDHO43175 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHGDHO43175 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHGDHO43175 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHGDHO43175 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHGDHO43175 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PHGDHO43175 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PHGDHO43175 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.27■□□□□ 0.52
PHGDHO43175 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PHGDHO43175 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PHGDHO43175 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.27■□□□□ 0.52
PHGDHO43175 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.27■□□□□ 0.52
PHGDHO43175 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PHGDHO43175 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.27■□□□□ 0.52
PHGDHO43175 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
PHGDHO43175 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHGDHO43175 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.27■□□□□ 0.52
PHGDHO43175 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHGDHO43175 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHGDHO43175 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.27■□□□□ 0.51
PHGDHO43175 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.27■□□□□ 0.51
PHGDHO43175 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
PHGDHO43175 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PHGDHO43175 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.26■□□□□ 0.51
PHGDHO43175 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.26■□□□□ 0.51
PHGDHO43175 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PHGDHO43175 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PHGDHO43175 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.26■□□□□ 0.51
PHGDHO43175 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.26■□□□□ 0.51
PHGDHO43175 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.26■□□□□ 0.51
PHGDHO43175 AP003071.4-201ENST00000562276 1284 ntBASIC18.26■□□□□ 0.51
PHGDHO43175 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.26■□□□□ 0.51
PHGDHO43175 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.26■□□□□ 0.51
PHGDHO43175 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.26■□□□□ 0.51
PHGDHO43175 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.26■□□□□ 0.51
PHGDHO43175 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PHGDHO43175 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PHGDHO43175 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PHGDHO43175 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.26■□□□□ 0.51
PHGDHO43175 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 AL096828.2-201ENST00000567259 1965 ntBASIC18.26■□□□□ 0.51
PHGDHO43175 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.26■□□□□ 0.51
PHGDHO43175 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PHGDHO43175 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PHGDHO43175 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHGDHO43175 GMCL1P1-201ENST00000463439 1581 ntBASIC18.25■□□□□ 0.51
PHGDHO43175 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.25■□□□□ 0.51
PHGDHO43175 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.25■□□□□ 0.51
PHGDHO43175 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
PHGDHO43175 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.25■□□□□ 0.51
PHGDHO43175 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.25■□□□□ 0.51
PHGDHO43175 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.25■□□□□ 0.51
PHGDHO43175 AC134043.2-201ENST00000624206 2238 ntBASIC18.25■□□□□ 0.51
PHGDHO43175 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PHGDHO43175 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PHGDHO43175 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.25■□□□□ 0.51
PHGDHO43175 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.25■□□□□ 0.51
PHGDHO43175 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.25■□□□□ 0.51
PHGDHO43175 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.25■□□□□ 0.51
PHGDHO43175 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms