Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.88■■□□□ 1.09
FOXN1O15353 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXN1O15353 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
FOXN1O15353 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.87■■□□□ 1.09
FOXN1O15353 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
FOXN1O15353 AL049812.1-201ENST00000432563 2267 ntBASIC21.87■■□□□ 1.09
FOXN1O15353 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
FOXN1O15353 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.87■■□□□ 1.09
FOXN1O15353 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.87■■□□□ 1.09
FOXN1O15353 HNRNPDP1-201ENST00000439535 754 ntBASIC21.87■■□□□ 1.09
FOXN1O15353 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.87■■□□□ 1.09
FOXN1O15353 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.87■■□□□ 1.09
FOXN1O15353 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.87■■□□□ 1.09
FOXN1O15353 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
FOXN1O15353 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN1O15353 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.87■■□□□ 1.09
FOXN1O15353 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
FOXN1O15353 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
FOXN1O15353 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
FOXN1O15353 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXN1O15353 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXN1O15353 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 AL591424.1-201ENST00000442569 1213 ntBASIC21.86■■□□□ 1.09
FOXN1O15353 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
FOXN1O15353 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXN1O15353 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.86■■□□□ 1.09
FOXN1O15353 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
FOXN1O15353 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXN1O15353 AP005901.3-202ENST00000581653 237 ntBASIC21.86■■□□□ 1.09
FOXN1O15353 AC008608.2-201ENST00000606089 416 ntBASIC21.86■■□□□ 1.09
FOXN1O15353 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
FOXN1O15353 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
FOXN1O15353 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
FOXN1O15353 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN1O15353 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
FOXN1O15353 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 TEX21P-204ENST00000641479 1693 ntBASIC21.85■■□□□ 1.09
FOXN1O15353 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.85■■□□□ 1.09
FOXN1O15353 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.85■■□□□ 1.09
FOXN1O15353 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.85■■□□□ 1.09
FOXN1O15353 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.85■■□□□ 1.09
FOXN1O15353 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.85■■□□□ 1.09
FOXN1O15353 IGHV3-22-201ENST00000520721 359 ntBASIC21.85■■□□□ 1.09
FOXN1O15353 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.85■■□□□ 1.09
FOXN1O15353 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.85■■□□□ 1.09
FOXN1O15353 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
FOXN1O15353 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.85■■□□□ 1.09
FOXN1O15353 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN1O15353 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
FOXN1O15353 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXN1O15353 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.84■■□□□ 1.09
FOXN1O15353 KRT18P3-201ENST00000451602 1288 ntBASIC21.84■■□□□ 1.09
FOXN1O15353 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
FOXN1O15353 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
FOXN1O15353 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXN1O15353 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXN1O15353 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.84■■□□□ 1.09
FOXN1O15353 AC040169.1-201ENST00000565382 521 ntBASIC21.84■■□□□ 1.09
FOXN1O15353 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.84■■□□□ 1.09
FOXN1O15353 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms