Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 AC090164.3-201ENST00000610780 2143 ntBASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 AC104581.1-202ENST00000635932 2618 ntBASIC16.49■□□□□ 0.23
TUBAL3A6NHL2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 BCL2-203ENST00000589955 5011 ntBASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.48■□□□□ 0.23
TUBAL3A6NHL2 BICD1-207ENST00000551848 1962 ntBASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 RASA4DP-201ENST00000460726 1199 ntBASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBAL3A6NHL2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBAL3A6NHL2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.46■□□□□ 0.23
TUBAL3A6NHL2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBAL3A6NHL2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
TUBAL3A6NHL2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBAL3A6NHL2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.46■□□□□ 0.23
TUBAL3A6NHL2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TUBAL3A6NHL2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms