Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 ESPNP-201ENST00000270691 2015 ntBASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 AL031598.1-201ENST00000561511 1773 ntBASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-6A0A0B4J262 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 AP006587.1-201ENST00000534129 1502 ntBASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ESRRAP1-201ENST00000400596 1257 ntBASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 FAM201B-201ENST00000458407 597 ntBASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-6A0A0B4J262 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 AD000864.1-201ENST00000624076 2295 ntBASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 AL118508.1-201ENST00000613502 2345 ntBASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms