Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 MINOS1P3-201ENST00000457048 203 ntBASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 EMBP1-201ENST00000458200 901 ntBASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 AC120498.9-201ENST00000339021 3867 ntBASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 AL499627.1-201ENST00000569373 2188 ntBASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV19A0A0A6YYK7 AL024508.2-201ENST00000607749 1894 ntBASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 TSPY12P-201ENST00000421279 868 ntBASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 AP005901.3-202ENST00000581653 237 ntBASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV19A0A0A6YYK7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 AC091607.1-201ENST00000490318 1060 ntBASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV19A0A0A6YYK7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRAV19A0A0A6YYK7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV19A0A0A6YYK7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV19A0A0A6YYK7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV19A0A0A6YYK7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV19A0A0A6YYK7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV19A0A0A6YYK7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV19A0A0A6YYK7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV19A0A0A6YYK7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV19A0A0A6YYK7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms