Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AC009102.3-201ENST00000623118 1491 ntBASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AL359075.1-203ENST00000462729 1002 ntBASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 GCSHP2-201ENST00000560971 527 ntBASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MIR3917-201ENST00000580971 93 ntBASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AC009113.1-201ENST00000570267 2443 ntBASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.71■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms