Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB1Q9Y5F3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 GCSHP2-201ENST00000560971 527 ntBASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 HYMAI.1-201ENST00000620949 238 ntBASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 AC104581.1-202ENST00000635932 2618 ntBASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 AC020763.4-201ENST00000623414 4170 ntBASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 HOXB1-202ENST00000577092 1414 ntBASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB1Q9Y5F3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 AL691432.3-201ENST00000621860 400 ntBASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB1Q9Y5F3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 LINC01311-201ENST00000565162 1445 ntBASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 HCG11-201ENST00000411553 5696 ntBASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 AP000523.1-201ENST00000398242 1049 ntBASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms