Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AL359736.2-201ENST00000621992 437 ntBASIC20.88■□□□□ 0.93
ARID3AQ99856 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARID3AQ99856 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.88■□□□□ 0.93
ARID3AQ99856 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARID3AQ99856 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.88■□□□□ 0.93
ARID3AQ99856 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARID3AQ99856 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARID3AQ99856 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
ARID3AQ99856 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ARID3AQ99856 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.87■□□□□ 0.93
ARID3AQ99856 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.87■□□□□ 0.93
ARID3AQ99856 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ARID3AQ99856 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.87■□□□□ 0.93
ARID3AQ99856 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ARID3AQ99856 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
ARID3AQ99856 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.87■□□□□ 0.93
ARID3AQ99856 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.87■□□□□ 0.93
ARID3AQ99856 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.87■□□□□ 0.93
ARID3AQ99856 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.87■□□□□ 0.93
ARID3AQ99856 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.87■□□□□ 0.93
ARID3AQ99856 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARID3AQ99856 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ARID3AQ99856 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ARID3AQ99856 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.86■□□□□ 0.93
ARID3AQ99856 HYMAI-201ENST00000635591 3347 ntBASIC20.86■□□□□ 0.93
ARID3AQ99856 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.86■□□□□ 0.93
ARID3AQ99856 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.86■□□□□ 0.93
ARID3AQ99856 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
ARID3AQ99856 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ARID3AQ99856 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.86■□□□□ 0.93
ARID3AQ99856 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.86■□□□□ 0.93
ARID3AQ99856 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
ARID3AQ99856 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.86■□□□□ 0.93
ARID3AQ99856 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.86■□□□□ 0.93
ARID3AQ99856 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.86■□□□□ 0.93
ARID3AQ99856 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.86■□□□□ 0.93
ARID3AQ99856 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.86■□□□□ 0.93
ARID3AQ99856 AC110285.5-201ENST00000611501 352 ntBASIC20.86■□□□□ 0.93
ARID3AQ99856 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.86■□□□□ 0.93
ARID3AQ99856 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.86■□□□□ 0.93
ARID3AQ99856 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.86■□□□□ 0.93
ARID3AQ99856 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.86■□□□□ 0.93
ARID3AQ99856 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ARID3AQ99856 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARID3AQ99856 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.85■□□□□ 0.93
ARID3AQ99856 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ARID3AQ99856 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ARID3AQ99856 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ARID3AQ99856 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.85■□□□□ 0.93
ARID3AQ99856 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.85■□□□□ 0.93
ARID3AQ99856 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ARID3AQ99856 C1QL1P1-201ENST00000568105 661 ntBASIC20.85■□□□□ 0.93
ARID3AQ99856 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.85■□□□□ 0.93
ARID3AQ99856 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
ARID3AQ99856 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ARID3AQ99856 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARID3AQ99856 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.85■□□□□ 0.93
ARID3AQ99856 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.85■□□□□ 0.93
ARID3AQ99856 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.84■□□□□ 0.93
ARID3AQ99856 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ARID3AQ99856 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms