Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 PRSS44-201ENST00000515154 1146 ntBASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 SOX15-203ENST00000570788 1093 ntBASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB3IL1Q8TBN0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IL1Q8TBN0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IL1Q8TBN0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IL1Q8TBN0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IL1Q8TBN0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IL1Q8TBN0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IL1Q8TBN0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IL1Q8TBN0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IL1Q8TBN0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 KRT18P41-201ENST00000518924 1277 ntBASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 PRKY-204ENST00000533551 1019 ntBASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 MIR4758-201ENST00000577688 71 ntBASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 MYLKP1-201ENST00000509077 1580 ntBASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3IL1Q8TBN0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 REXO1L9P-201ENST00000604264 2108 ntBASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 Z85996.1-201ENST00000494644 937 ntBASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 AC004264.1-201ENST00000608354 794 ntBASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAB3IL1Q8TBN0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms