Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 KRT8P32-201ENST00000512863 1461 ntBASIC18.65■□□□□ 0.58
PGBD3Q8N328 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD3Q8N328 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.64■□□□□ 0.58
PGBD3Q8N328 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PGBD3Q8N328 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PGBD3Q8N328 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PGBD3Q8N328 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PGBD3Q8N328 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
PGBD3Q8N328 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.64■□□□□ 0.57
PGBD3Q8N328 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.64■□□□□ 0.57
PGBD3Q8N328 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.64■□□□□ 0.57
PGBD3Q8N328 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.64■□□□□ 0.57
PGBD3Q8N328 Z69720.1-201ENST00000601483 472 ntBASIC18.64■□□□□ 0.57
PGBD3Q8N328 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.64■□□□□ 0.57
PGBD3Q8N328 GPR32P1-201ENST00000601788 811 ntBASIC18.64■□□□□ 0.57
PGBD3Q8N328 AC099336.1-202ENST00000602961 463 ntBASIC18.64■□□□□ 0.57
PGBD3Q8N328 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PGBD3Q8N328 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.64■□□□□ 0.57
PGBD3Q8N328 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PGBD3Q8N328 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD3Q8N328 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 AC009078.2-202ENST00000463353 338 ntBASIC18.63■□□□□ 0.57
PGBD3Q8N328 GUSBP12-201ENST00000513727 720 ntBASIC18.63■□□□□ 0.57
PGBD3Q8N328 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 AL390719.2-201ENST00000606993 987 ntBASIC18.63■□□□□ 0.57
PGBD3Q8N328 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 AC124864.1-201ENST00000623408 392 ntBASIC18.63■□□□□ 0.57
PGBD3Q8N328 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.63■□□□□ 0.57
PGBD3Q8N328 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD3Q8N328 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 AC079776.4-201ENST00000511039 504 ntBASIC18.62■□□□□ 0.57
PGBD3Q8N328 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 AC024563.2-201ENST00000603282 481 ntBASIC18.62■□□□□ 0.57
PGBD3Q8N328 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.62■□□□□ 0.57
PGBD3Q8N328 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.62■□□□□ 0.57
PGBD3Q8N328 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD3Q8N328 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms