Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 POU5F1P4-201ENST00000413175 1085 ntBASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
HIST3H2BBQ8N257 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 MIR3181-201ENST00000578512 73 ntBASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2BBQ8N257 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 KRT8P20-201ENST00000423953 1409 ntBASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 AL096828.2-201ENST00000567259 1965 ntBASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.71□□□□□ -0.22
HIST3H2BBQ8N257 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms