Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TFP1-202ENST00000475455 1573 ntBASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 AL031432.3-201ENST00000607698 485 ntBASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 AC016405.3-201ENST00000607710 860 ntBASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.68■□□□□ 0.26
CROCCP3Q8IVE0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 AC010536.3-201ENST00000620306 533 ntBASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 LINC00554-201ENST00000564841 3011 ntBASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 AC004854.2-201ENST00000608450 1441 ntBASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.67■□□□□ 0.26
CROCCP3Q8IVE0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 SDHAP1-207ENST00000440850 2000 ntBASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 RARRES2P4-201ENST00000514074 484 ntBASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 AC005052.1-201ENST00000625181 2492 ntBASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 AC013268.1-206ENST00000638368 961 ntBASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 AC112229.1-201ENST00000639295 961 ntBASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 PKD1P5-201ENST00000532415 10291 ntBASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms