Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 ARMC10P1-201ENST00000313754 855 ntBASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 KRT18P38-201ENST00000449496 1282 ntBASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 RASA4DP-201ENST00000460726 1199 ntBASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 AC034232.1-201ENST00000506026 1064 ntBASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 KRT18P35-201ENST00000510488 1269 ntBASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 AC022616.7-201ENST00000525383 220 ntBASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 MIR3180-4-201ENST00000582223 153 ntBASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD3Q7Z3D4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LYSMD3Q7Z3D4 AC020763.4-201ENST00000623414 4170 ntBASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 AC092647.4-201ENST00000457211 535 ntBASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 LINC01238-205ENST00000567549 1107 ntBASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 AC009102.3-201ENST00000623118 1491 ntBASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD3Q7Z3D4 AC009113.1-201ENST00000570267 2443 ntBASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 MIR149-201ENST00000384879 89 ntBASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 STARP1-201ENST00000397973 869 ntBASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 HOMER2P1-201ENST00000455653 964 ntBASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.44■□□□□ 0.54
LYSMD3Q7Z3D4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms