Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TUBA1AQ71U36 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 NIFKP9-201ENST00000419265 221 ntBASIC16.98■□□□□ 0.31
TUBA1AQ71U36 AL353807.1-201ENST00000427475 662 ntBASIC16.98■□□□□ 0.31
TUBA1AQ71U36 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 HLA-A-209ENST00000638375 975 ntBASIC16.98■□□□□ 0.31
TUBA1AQ71U36 AC083906.6-201ENST00000641366 219 ntBASIC16.98■□□□□ 0.31
TUBA1AQ71U36 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TUBA1AQ71U36 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 CD177P1-201ENST00000606252 935 ntBASIC16.97■□□□□ 0.31
TUBA1AQ71U36 AC073195.1-201ENST00000607241 877 ntBASIC16.97■□□□□ 0.31
TUBA1AQ71U36 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA1AQ71U36 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 PCDHA12-202ENST00000613593 2588 ntBASIC16.96■□□□□ 0.31
TUBA1AQ71U36 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA1AQ71U36 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms