Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 KRT8P9-201ENST00000558927 1449 ntBASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 AL139384.1-201ENST00000612143 3047 ntBASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 AL499627.1-201ENST00000569373 2188 ntBASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 CYP2D8P-201ENST00000433633 1490 ntBASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 TSPY17P-201ENST00000450329 467 ntBASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN4Q6PJG9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 AC092338.2-201ENST00000568827 1415 ntBASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 MMP23A-201ENST00000234610 1017 ntBASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 AP003041.3-201ENST00000527151 707 ntBASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 MIR4674-201ENST00000582457 87 ntBASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 AC099398.1-201ENST00000567919 2776 ntBASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRFN4Q6PJG9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms